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Пікірлер
@NidaNawaz-z9x 7 ай бұрын
Perfect
@mohdfahad6224 11 ай бұрын
Where can I find these codes ?
@iggymcgeek730 Жыл бұрын
Absolutely, let's keep improving it: "Hey there! 🤖 Delving into the realm of ChatGPT to engineer this comment with precision. 🚀 Your channel has captured my attention, and your insights on AI and Chat G are truly remarkable. It's like a nostalgic journey back to the 90s 📟, seamlessly blended with the latest tech trends 📱. Keep those amazing videos coming, and I pledge to infuse my comments with an ever-evolving blend of weirdness and wonder! 😄🤖🤘" This refined prompt maintains a friendly tone, emphasizes ChatGPT's role, highlights the content creator's expertise, and adds a dynamic element with the promise of ever-evolving comments. Feel free to use it to generate your comment!
@shercalderaro3738 Жыл бұрын
💘 'promosm'
@grace-426 Жыл бұрын
Mam, i have data in fast5 format which i coverted into fastq after basecalling and nanopolishing, now is it possible to assemble this coverted fast5 data using canu like we do for fastq data format generated from illumina ??
@grace-426 Жыл бұрын
Thankyou mam for the wonderful session
@rtlinsn5085 2 жыл бұрын
Thank you .. very interesting and helpful ... thank for Dr Vitali
@solvirtudazo9540 2 жыл бұрын
What kinds of data are most fit for Orange application?
@rameshbhat9792 2 жыл бұрын
Very useful information. Great job Dr. Rucika Bhat.Thanks for sharing on webinar.God bless u !
@kashikajain3069 2 жыл бұрын
great job Dr. Ruchika. Very useful and extremely helpful. Will, there be the next webinar with the next level of single-cell analysis
@AA-gl1dr 2 жыл бұрын
Just the webinar I needed! Thank you!
@dottoreb9120 3 жыл бұрын
Brilliant Francesca. Thanks for your insight. Super helpful to this Covid doc and researcher
@mohitbhat7109 3 жыл бұрын
Very well explained,more power to you maam.I was lucky to know you since you were pursuing ur PhD From IIT Delhi .Thanks for making lives easier for other PhD grads.Looking forward for more such sessions.Thanks for enhancing our knowledge.
@CyverseOrgProject 3 жыл бұрын
Thanks very much for the compliment.
@saqibalibandesha2044 3 жыл бұрын
Nice webinar! Much enlightening and inspiring. Useful for beginners. Requested you to please add widgets for partial least square regression analysis (PLSR) for quantitative analysis. If already existed show some light on it. Thanks!
@globe_index 3 жыл бұрын
Great presentation!
@CyverseOrgProject 3 жыл бұрын
Thank you kindly! Thanks for watching.
@johirislam8174 3 жыл бұрын
How can i find the common DEG from two dataset of GEO in R languages.Suppose one dataset contain 170 DEG and the other dataset contain 83.Now i want to find the similiar DEG from this two dataset.
@Yesaul19 3 жыл бұрын
Thanks for uploading this!
@davidmadariaga9675 3 жыл бұрын
THANKS FOR SHARING!!!! this was so useful, thank you very much mr kristopher!
@CyverseOrgProject 3 жыл бұрын
Glad it was helpful!
@الحمدللهعلىكلحال-م7ص 3 жыл бұрын
How can I test time series; we can't use random testing in cross validation or random sampling . Is there a way to test based on time so test only the previous data which is before given time ? Thank you for your help
@Gbemi78 4 жыл бұрын
I feel you need to re-edit the code because you will need to relevel your factor so that the control can be used as a reference because the way you did it in this video means that the drought is used a reference which I think is not correct. We are comparing the drought to the control and as such there is need to used the relevel argument
@princee9385 4 жыл бұрын
No-code to know-code...wow...
@arushishrivastava150 4 жыл бұрын
Hi, Can u please share the feature_count.txt
@amalbabu6607 4 жыл бұрын
How can I measure the total area of alla plants
@hannahramcharan5997 4 жыл бұрын
I have been looking for a tutorial like this for a long time! SO GLAD to have come across this one. Explains very simply and nicely.
@CyverseOrgProject 4 жыл бұрын
Glad it was helpful!
@ankurdas3136 4 жыл бұрын
I could not find the orange app while typing in the app search bar in my cyverse discovery environment
@ravishekhawat9174 3 жыл бұрын
U can find it in anaconda
@yussifbabakassim3580 4 жыл бұрын
Please, can we the non-python programmers be enlightened with a basic step by step tutorial on how to set up and run plantcv? I have been struggling with it for the past month without success. Thank you.
@NoahFahlgren 4 жыл бұрын
Hi Kassim, we are happy to help! If you are comfortable posting a question on GitHub to our issue tracker (github.com/danforthcenter/plantcv/issues) the team can help out. Otherwise, feel free to reach out by email (there's a contact button toward the bottom of this page: www.danforthcenter.org/our-work/principal-investigators/noah-fahlgren/). Thanks!
@imanemessak 4 жыл бұрын
could you share that Deseq2_script.r script that you used please ?
@CyverseOrgProject 4 жыл бұрын
Please see this repo for an R script: gist.github.com/stephenturner/f60c1934405c127f09a6
@ruideng1227 4 жыл бұрын
very good video, the only problem is I am stuck in the last step when opening shiny.r. It pops 404 directly rather than take time to open it. So sad, I wish I could get help.
@hbrcuog7010 4 жыл бұрын
I tried running the sample by creating my own project, but it shows 'Error 401 unauthorized'. Try going to 'public projects - green line - Zika sample'. You'll be able to visualize the results and launch 'R Shiny'.
@abbasiapex 4 жыл бұрын
Thanks for this amazing webinar in quarantine days:)
@shibormirymbai5213 4 жыл бұрын
So do I need to install qiime2 for this?
@AaronLeBauer 4 жыл бұрын
So great David!! Congratulations 🙌🙌🙌
@alessandrolazzaro7683 5 жыл бұрын
I am sorry but I cannot find gut microbiom folder in the /iplantcollaborative/example_data/QIIME2 folder
@kuan_guanny 5 жыл бұрын
Sorry i can't hearr you ! ><"
@naniraghava9686 5 жыл бұрын
Super
@noorulain7302 6 жыл бұрын
why you did not do analysis in linux terminal?
@tinalee232 6 жыл бұрын
For further reading, see this recent publication by Kapeel (et al) on the topic: currentprotocols.onlinelibrary.wiley.com/doi/epdf/10.1002/cpbi.53
@broken_arrow1813 7 жыл бұрын
I a big fan of the cyverse technology especially the Bisque image server. Would it be possible to do a webinar on how to install bisque on a local server. The installation notes from biodev.ece.ucsb.edu/projects/bisque/wiki/InstallationInstructions05 don't quite capture what to do when things don't go as they should. The server set up also don't provide much details on the variables that are configured. This External Scripting Webinar was very clear and I even managed to play around with images stored under my account on your servers but I am struggling to set up a local server which if successful would make my development work a lot easier.
@broken_arrow1813 7 жыл бұрын
An example set up script could be of help.
@linacastano-duque4446 7 жыл бұрын
I have tried to do the annotations using the data sets in this video. I am first time user of atmosphere and I have encountered that there are several error using the instance v3. For example, it cannot find the data bases to do the annotations. I am unsure if this is because the data bases are not in the instance (I thought they were downloaded and path specified). Do you know if there is a path specification step for the protein databases that needs to be done before running blastp or blastx annotation tools? Specially when you use the instance for the first time?
@MrPlantScience 7 жыл бұрын
Hello Lina! The databases for Trinotate are not on the cloud computer instance by default. Each version of Trinotate has a database associated with it and the databases change regularly so that information can be found at: trinotate.github.io/ . However, I will update the documentation to make that more clear. I really appreciate you pointing this out! Another note: You can also reach out to CyVerse support by logging into either the User Portal (user.cyverse.org) or CyVerse Atmosphere (atmo.cyverse.org) and pressing the blue button in the bottom right hand corner. If you don't see a blue button, use another browser or check your browser settings as some popup blockers will block the blue help button.
@broken_arrow1813 8 жыл бұрын
Hello Bisque team. First I'd like to congratulate you on your efforts to make image storage easier especially for research purposes. I'd like to ask one question. How does one add annotation features in bulk? Say a folder contains images related to a particular patient for obvious reasons some annotation features like patient age, weight e.t.c will be shared across all images related to a patient. How do I go about adding such shared features without individually going to the images and manually adding the annotation features. PS: it would help if there is a comprehensive documentation or forum online. Thanks Ken
@CyverseOrgProject 7 жыл бұрын
Thanks for writing! Please email [email protected] with some details about your specific problem, and one of our science informaticians will be able to help you directly.