Phil Ewels

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@Kat-lx7qq 4 ай бұрын

excellent! what a fantastic tool. thank you

@kiplimosimon1429 7 ай бұрын

Thanks for such a nice explanation

@Aju96 8 ай бұрын

Amazing View ! @Phil Ewels

@nasserbenomar Жыл бұрын

hey there i have a problem .. multiqc : No analysis results found. Cleaning up.. i cant get the multiqc report of the fastqc reports that i have !!

@wondessenayalew3877 Жыл бұрын

I run MultiQC for Aligned sequence and generate all the statistics except Sequence Counts and alignment statistics. Therefore, is there any online support available to fix the problem I am faced? Thanks!

@Trainer_Yuulee Жыл бұрын

This tool is neat!

@brendahoyos2843 2 жыл бұрын

are you running this code in Python?

@arnabmandal6040 2 жыл бұрын

what is m aligned? can anyone help?

@anoobvinu 11 ай бұрын

mapped reads in million

@ishadmehta 2 жыл бұрын

Great tool. Thank you

@Infiny92 2 жыл бұрын

You’re a blessing to the world. Thank you for creating this wonderful tool :D

@shanmugapriyadhanasekran4877 2 жыл бұрын

Hi, When I try running the command python setup.py , I'm getting below error admin1@small:~/Desktop/ASSIGNMENT-07-03-2022/tools/MultiQC$ python2 setup.py File "setup.py", line 34 """ ^ SyntaxError: invalid syntax Kindly help.

@nicoleyan2548 2 жыл бұрын

I met the same error,,, how did you fix it?

@hamzehalipour7286 3 жыл бұрын

How we can see fasta sequences??

@TingleMingle42 3 жыл бұрын

you are the best!

@Epipedobatideo 3 жыл бұрын

This is a trully usefull tool! Thank you

@StarrDaniel 3 жыл бұрын

Gorgeous

@StarrDaniel 3 жыл бұрын

So pretty I

@NomadBit8848 3 жыл бұрын

thank you sir ❤

@가족두분꺼지세요 3 жыл бұрын

conda install -c bioconda multiqc doesn't work anymore. It seems to be incompatible with the new version of Python.

@ewels 3 жыл бұрын

Ah, well spotted! The website docs have been updated but I forgot about the video. You're right that the command no longer works, but it's not the version of Python that is the problem - it's that bioconda changed. You now need to set up your conda channels as described in the bioconda docs here: bioconda.github.io/user/install.html#set-up-channels and then run without the -c flag. So 'conda install mutiqc'. Then it should work. Note that MultiQC is currently tested on Python 3.6 - 3.9. It is no longer compatible with Python 2.

@nguyenlephuong9489 2 жыл бұрын

@@ewels I used "conda install multiqc" as well as "conda install -c bioconda multiqc", both can not run multiqc. Could you test the installation using conda again? Thank you

@ewels 2 жыл бұрын

@@nguyenlephuong9489 Conda installation issues are often because bioconda hasn't been set up properly. Please check the docs about channels here: bioconda.github.io If you're still having problems after that then please make an issue on the GitHub repo with as many details as possible and I'll try to help.

@nguyenlephuong9489 2 жыл бұрын

@@ewelsI am using hpc to install multiqc. I followed your instructions to set up conda channels: conda config --add channels defaults conda config --add channels bioconda conda config --add channels conda-forge I then used conda create --name py3.7 python=3.7 && source activate py3.7 && conda install multiqc. However, the installation was killed " as reported below: Fetching package metadata ............... Killed. I will write an issue in the GitHub repo. Thank you very much for your time and your kind help