RNA-SEQ WITH THE UCSC GENOME BROWSER
22:54
GENE EDITING EXPLAINED!
20:29
4 жыл бұрын
Introduction to chromatin structure
8:57
Пікірлер
@coolalexpcs
@coolalexpcs 10 күн бұрын
Very helpful and clear tutorial, really appreciate it
@corhannn
@corhannn 15 күн бұрын
I can't thank you enough! You made my day! 🙏🏻🙏🏻🙏🏻
@cahidekartal3567
@cahidekartal3567 16 күн бұрын
👌👌👌👌👌
@yaseenkattan
@yaseenkattan 24 күн бұрын
Mandatory viewing for using the tool, thank you!
@chisomjoshuaonu4059
@chisomjoshuaonu4059 Ай бұрын
Great presentation
@sreeram6416
@sreeram6416 Ай бұрын
in the enter gene list can we provide the id of our circular rna?
@nadiyatariq1822
@nadiyatariq1822 Ай бұрын
Awesome
@adeldz6939
@adeldz6939 2 ай бұрын
In the first step, do you mean about id the accession number or another id ?
@mostafajahanifar4716
@mostafajahanifar4716 2 ай бұрын
It was a great tutorial. It would be nice if you could expand on the meaning of each part and their function in another video. For example, maybe explain how the acquired data can be used in research (or at least provide resources for beginners to follow and learn more). Also, if there are technical or specific types of plots that can visualize the results taken from DAVID, it would be very nice if you can cover them as well.
@sheetal_soul
@sheetal_soul 3 ай бұрын
what is the alternative for Drosophila?
@sabirasharif2207
@sabirasharif2207 3 ай бұрын
Thankyou
@anirakbenadam112
@anirakbenadam112 3 ай бұрын
Your explantions are very clear, I enjoyed your videos and learned a lot. Thank you very much!!!
@catherinepuellomora8041
@catherinepuellomora8041 4 ай бұрын
Very clear and specific ¡¡thanks
@cherylmockotr
@cherylmockotr 4 ай бұрын
Fabulous! I haven't paid attention to epigenetic advancements in a decade or more, and am amazed at how much more has been discovered. The complexity blows me away!!
@chuanyuguo3232
@chuanyuguo3232 4 ай бұрын
So how to use this software to do GSEA based on a specific subset genes or a defined subset genes by ourselves?
@GenomicsGurus
@GenomicsGurus 4 ай бұрын
You can create your own list of genes. Download one of the genesets so you can see the format - it's very straightforward.
@chuanyuguo3232
@chuanyuguo3232 4 ай бұрын
Thanks. Where I can upload my own list of the genes in the software?@@GenomicsGurus
@GenomicsGurus
@GenomicsGurus 4 ай бұрын
@@chuanyuguo3232 Upload your gmx file using the load data process. Then, when you choose the gene sets database, there is a tab called gene matrix (localgmx.gmt), and you should see your file listed there. Good luck!
@micahforsythe4684
@micahforsythe4684 4 ай бұрын
This was very helpful thanks!
@renatameza4947
@renatameza4947 5 ай бұрын
What means enrichment?
@GenomicsGurus
@GenomicsGurus 5 ай бұрын
If something is enriched, it means there is more of it in the sample
@gregsmith6756
@gregsmith6756 5 ай бұрын
I'm going to have to watch the Prime editing part 10 times more to understand it. It's simple yet complicated.
@itscoldhere7618
@itscoldhere7618 5 ай бұрын
thank you
@meltemtutar4673
@meltemtutar4673 7 ай бұрын
Hi, thanks for the tutorial. I had some trouble downloading the GSEA software so I ended up using the GenePattern UI. Is there any downside to using this website instead of the GSEA desktop application? Thanks
@user-oo7oo9pw5l
@user-oo7oo9pw5l 8 ай бұрын
Really nice and useful video. Thank you.
@GenomicsGurus
@GenomicsGurus 8 ай бұрын
Glad it was helpful!
@itscoldhere7618
@itscoldhere7618 8 ай бұрын
So much help. Thank you.
@GenomicsGurus
@GenomicsGurus 8 ай бұрын
Glad it helped!
@user-nu1sb2ob8x
@user-nu1sb2ob8x 8 ай бұрын
Thank you so much for this tutorial! I'm new to proteomics and this video helped me a lot to get started on my data analysis
@GenomicsGurus
@GenomicsGurus 8 ай бұрын
Glad it was helpful!
@mahideenafridi2934
@mahideenafridi2934 8 ай бұрын
great
@user-sh2ct4sk2o
@user-sh2ct4sk2o 8 ай бұрын
Thanks! Beatifull lecture. Really sad that you stopped making videos
@siavashkhosravi3175
@siavashkhosravi3175 8 ай бұрын
thanks god, someone finally made all these clear. great job.
@catcatmiaomiao5850
@catcatmiaomiao5850 9 ай бұрын
better explanation than my prof. who only says useless nonsense during the lectures.
@SvitlanaKamenska
@SvitlanaKamenska 10 ай бұрын
Thank you! It is very well explained complext topic
@user-rf1nr1em3c
@user-rf1nr1em3c 10 ай бұрын
This is GOLD! I am a biologist who does not know anything about bioinformatics, i've done a differential expression analysis of genes using RStudio and then i was like, what now, what to do with these DEGs? And then i found this amazing tutorial! THANK YOU! <3
@shivamsingh21
@shivamsingh21 11 ай бұрын
Superb concept So much Thank
@user-su1fl5do9z
@user-su1fl5do9z Жыл бұрын
Very useful, thank you!
@Bee-zp5vo
@Bee-zp5vo Жыл бұрын
A great help. Thankyou mam
@elviras1949
@elviras1949 Жыл бұрын
Thank you very much for the video! It helps! I have my functional annotation chart of GO TERM, now how could I export it to excel?
@GenomicsGurus
@GenomicsGurus Жыл бұрын
You would need to download the spreadsheet data (there is button to do that) and then plot your own graph in excel
@elviras1949
@elviras1949 11 ай бұрын
@@GenomicsGurus thank you!
@analiasoledad6999
@analiasoledad6999 Жыл бұрын
This video is amazing, so far my favorite. Really clear and straightforward, I truly appreciate it! Great job! many thanks :)
@GenomicsGurus
@GenomicsGurus Жыл бұрын
Thanks!
@Kehinde747
@Kehinde747 Жыл бұрын
Very helpful - I have dabbled with DAVID from occasionally but this is the first time I really understood how to move beyond the initial set of results it gives.
@GenomicsGurus
@GenomicsGurus Жыл бұрын
Great :)
@aaakashable
@aaakashable Жыл бұрын
Excellent talk Katherine
@faridhakimi1146
@faridhakimi1146 Жыл бұрын
Lovely ❤thanks for the great lecture
@jamesraymond1158
@jamesraymond1158 Жыл бұрын
Excellent! I finally understand it. However, one question: at 3:40 where the TALENs are biding to the DNA, it seems that the TALENs are too bulky to fit close enough together to bind to successive nucleotides.
@GenomicsGurus
@GenomicsGurus Жыл бұрын
The successive domains curve round the the DNA helix like a propeller - it's an amazing structure
@anilkumarram7731
@anilkumarram7731 Жыл бұрын
Great
@user-ei4ek9iv7x
@user-ei4ek9iv7x Жыл бұрын
Thank you for this video I have a problem: GSEA don't run with download files from GSEA with .gmt format. I want to use the gene sets that I selected. Can anybody help me? Thank you so much
@s0n1c88
@s0n1c88 Жыл бұрын
I have a wish 🙏 god, please let her return to youtube to make her awesome videos 🙏 Amen 🙏 Love from Turkey My Teacher 🙏
@edthoreum7625
@edthoreum7625 Жыл бұрын
5:00 histone
@lumpyspaceprincess6335
@lumpyspaceprincess6335 Жыл бұрын
Is this channel aims scientists
@xuzhiwen8298
@xuzhiwen8298 Жыл бұрын
Super helpful and clear tutorial! I appreciate you saved me a lot time to figure out how to do such analysis!
@agnihotrinitin
@agnihotrinitin Жыл бұрын
Extremely helpful. Thank you very much.
@akashphukan6452
@akashphukan6452 Жыл бұрын
Thank you
@akashphukan6452
@akashphukan6452 Жыл бұрын
Thank you
@KimsDerick7
@KimsDerick7 Жыл бұрын
Thank you so much. You have explained it in a simple and understanding way. I rate 5/5.
@erfan74ir
@erfan74ir Жыл бұрын
Thanks for the great resources you made. Very helpful :-).
@SB-nh7uv
@SB-nh7uv Жыл бұрын
Thank you for the video. How does one screen for mutations cause by off-target cutting of Cas9?