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@Deepak.physicist
@Deepak.physicist 2 күн бұрын
Nice video. great work. I have a small doubt, how to find COHP between specific atom in a material with free molecule say CO2 adsorbed on Fe decorated graphene. I want to find pCOHP for Fe atom and CO2 molecule. I couldn't understand the molecule keyword and the cohpBetween frag1 atom 2.. etc. Even if I mention CO2 atom number in molecule keyword as molecule atom 27 atom 28 and cohpbetween atom 26 frag 1, I couldn't get -pCOHP. Also the time for calculation is taking too much with 16 procs system.. any tips?
@abidakarime
@abidakarime 4 күн бұрын
Do we used same method for d block element like irradium complex for dft calculation please explain the input file for irradium complex
@janggg11023
@janggg11023 4 күн бұрын
Respected sir, can you please guide how to calculate vertical ionization potential (VIP), adiabatic ionization potential (AIP), vertical electron affinities (VEA), adiabatic electron affinities (AEA), electron extraction potential (EEP), hole extraction potential (HEP), hole reorganisation energy (λ+), and electron reorganisation energy (λ-) specifically, I don't know much about gaussians but after watching your video it is very easy to understand. However I can't calculate the above values
@janggg11023
@janggg11023 4 күн бұрын
For the optimization with about 47 atoms is there any way I can reduce the waiting time? it took me 5 days to complete the optimization
@gizawbirhanu3957
@gizawbirhanu3957 7 күн бұрын
Thanks Sir! Very useful info! Can you also show us how to calculate for the change in Gibb's free energy of two polymer blends (mixture of 2 polymers)? Is it possible to follow the same procedure?
@zeynelabidinerol2293
@zeynelabidinerol2293 9 күн бұрын
I have some questions: A. Initially, when converting the XDATCAR file to PDP, we write 737 "MD Trajectories of Selected Atoms with PDP Format". Then we say 1 "(Select Atoms by Atomic Indices/Labels)". A1. Why don't we say "4 (Select Atoms by SELECTED_ATOMS_LIST File)". What happens if we say 4? A.2. After saying "1", we say "all". Why did we say "all" and not write the N Fe elements? What happens if we write them? A.3. After saying "all", we say "How many initial frames do you want to skip? [Typical value: < 1000]" Then why do we write 0? Can't we write another value? What happens if we write it? A.4. "Which frames will be used to calculate? [Typical value: <=5]" (e.g., 10 means the 1st, 11st, 21st, ... frame will be used). We say 1. Why don't we enter another number? Like 1, 11, 21. B. After creating the "MD_TRAJECTORIES.pdb" file, we need the MSD. We wrote 72 and 722 "Mean Squared Displacement Using FFT (Recommend)". B.1. Then we write 1 "Select Atoms by Atomic Indices/Labels" again. Similarly, why didn't we write 4 "(04)Select Atoms by SELECTED_ATOMS_LIST File"? If I type 4 and 3, wouldn't it be "(03) Reading Atomic Relaxations From XDATCAR File... How many initial frames do you want to skip? [Typical value: < 1000]" and then select my name? B.2. After writing "Select Atoms by Atomic Indices/Labels", we wrote N Fe. Why didn't we write the other element "Carbon, C"? What is the reason for taking the 4 N elements around Fe? Should it always be like this? Should I select in a square shape? B.3. What would happen if there were more than one Fe element?
@lucas_citolino
@lucas_citolino 9 күн бұрын
This video is very useful, but it is impossible to understand the english.
@zeynelabidinerol2293
@zeynelabidinerol2293 10 күн бұрын
thanks
@dbinfotech
@dbinfotech 10 күн бұрын
Thank you for your support, please subscribe my KZbin channel and share with your friends ☺️
@NimraMaqsood-i3d
@NimraMaqsood-i3d 11 күн бұрын
Why we need 3 files....if we can just compute the last file named MO to calculate spin density
@NimraMaqsood-i3d
@NimraMaqsood-i3d 11 күн бұрын
İf we can use just LanL2dz method for complex systems?
@dbinfotech
@dbinfotech 10 күн бұрын
You can try LanL2DZ method, it is often used for complex systems but you should test its accuracy for your specific case.
@zeynelabidinerol2293
@zeynelabidinerol2293 11 күн бұрын
THANKS
@NimraMaqsood-i3d
@NimraMaqsood-i3d 13 күн бұрын
I want to calculate spin density using DFT method. The structure is extracted from xrd crystal structure data...metal Y with +3 charge is connected to N and S of the ligand... I want to optimise the structure with -1 charge on the ligand...how I can do this... kindly guide
@NimraMaqsood-i3d
@NimraMaqsood-i3d 13 күн бұрын
İf I can perform spin density calculation for complex using guassian if yes then how? Kindly suggest me some ideas
@dbinfotech
@dbinfotech 13 күн бұрын
Yes, you can perform spin density calculations for complex molecules using Gaussian. You can this video: How to do spin density calculation using Gaussian 09W or G16 kzbin.info/www/bejne/epa7iX2kmraYfJY
@NimraMaqsood-i3d
@NimraMaqsood-i3d 13 күн бұрын
@dbinfotech thanks 👍
@Noor-y3i7m
@Noor-y3i7m 13 күн бұрын
Where mis NGXF values
@thetradernaveen
@thetradernaveen 13 күн бұрын
Hello sir, Once in my calculations I performed frequency calculation and It was all fine. But this time with new system I am always getting the error : Error reading item NFREE from file INCAR. Error code was IERR= 5 ... . Can you please help me with it
@SyedaAqsaHassan-j4y
@SyedaAqsaHassan-j4y 13 күн бұрын
Thanks a lot for sharing in such a valueable way.
@dbinfotech
@dbinfotech 13 күн бұрын
Please subscribe to my channel and share with your friends. Thank you ☺️
@SyedaAqsaHassan-j4y
@SyedaAqsaHassan-j4y 9 күн бұрын
Yeah Sir , I already did and my friends are also following you
@aberatadie2854
@aberatadie2854 17 күн бұрын
Thank you very much. my output cannot uploaded while i try to drug it to open at chemissian. what shal I do?
@dbinfotech
@dbinfotech 17 күн бұрын
You should add pop=full in route section, then only you can able view your spectra using chemissian
@user-mx1ut7sh9p
@user-mx1ut7sh9p 21 күн бұрын
Thank you for this tutorial. Could you please make a video explaining how to prepare the input files for adsorbing the intermediates. would I need to relax OOH and how do I create the POSCAR on materials studio for example. I watched all the videos you recommended but still not sure, since OOH seems complex.
@dbinfotech
@dbinfotech 17 күн бұрын
First create OOH intermediate structure in ms Then use vesta to make POSCAR files, you can watch my video how to make poscar file from .cif file
@TeeMidlaj
@TeeMidlaj 22 күн бұрын
Thank you so much
@dbinfotech
@dbinfotech 22 күн бұрын
Thank you for comment, please subscribe my channel, share to your friends
@rishabhmishra6545
@rishabhmishra6545 23 күн бұрын
amazing tutorial sir thanks for this amazing lecture series..
@dbinfotech
@dbinfotech 23 күн бұрын
Thank you for comment, please subscribe my channel, share to your friends
@swagotomsarkar2994
@swagotomsarkar2994 23 күн бұрын
How did they guess those IS IM1 ....etc initially?
@swagotomsarkar2994
@swagotomsarkar2994 25 күн бұрын
Sir, what if i don't know what the transition structure is?
@swagotomsarkar2994
@swagotomsarkar2994 25 күн бұрын
Dear Sir, How to add pH value in gaussian calculation, please?
@swagotomsarkar2994
@swagotomsarkar2994 25 күн бұрын
Dear Sir, How to add pH in gaussian calculation, please? Thank you.
@subhrakantota8871
@subhrakantota8871 26 күн бұрын
Why did not you use build layers option to make structure ?
@user-sd7ir4us4c
@user-sd7ir4us4c 29 күн бұрын
Hi, thank you for great video. I want to geometry optimization in a Non-Neutral Environment (MOF with K+ Addition) Is it Okay to use NELECT tag for making the structure neutral?
@user-sd7ir4us4c
@user-sd7ir4us4c 29 күн бұрын
Hi, I want to do geometry optimization in a Non-Neutral Environment (MOF with K+ Addition) Is it Okay to use NELECT tag for making the system neutral?
@SulemanKhan-fc9my
@SulemanKhan-fc9my Ай бұрын
Please could you make the crystal structure of covalent organic frameworks!
@usmanchem08
@usmanchem08 Ай бұрын
Boss from where the Bader lnx file came?
@usmanchem08
@usmanchem08 Ай бұрын
I want to bow to you sir. What an amazing human u are...! Thank you for your work
@dbinfotech
@dbinfotech Ай бұрын
Thank you so much for your support, pleasure subscribing to my channel and share to your friends
@NguyenNguyen-cj7bg
@NguyenNguyen-cj7bg Ай бұрын
Hi, I see you do calculation vasp on KISTS super computer, I have an account but I am struggling of doing calculation vasp. Could you please make a video about doing vasp on KISTS supercomputer.
@dbinfotech
@dbinfotech Ай бұрын
You can buy VASP license, install with Linux expert, they will make you for submission script to run vasp calculations
@NguyenNguyen-cj7bg
@NguyenNguyen-cj7bg Ай бұрын
@@dbinfotech My lab had a license for VASP and run it on our computer and it run very slow, so we try using the supercomputer. I had try the manual in the KISTS supercomputer but it not run. Could you help me with this problem. Many thanks.
@usmanchem08
@usmanchem08 Ай бұрын
thank you for your amazing videos. u r a life saver.
@dbinfotech
@dbinfotech Ай бұрын
Thank you for your support, please subscribe and share with your friends ☺️
@NimraMaqsood-i3d
@NimraMaqsood-i3d Ай бұрын
Sir you made this input file from opt.log file ?
@dbinfotech
@dbinfotech Ай бұрын
Yes, the input file was created from the optimized geometry
@LucioDamiánDeLangheOrellano
@LucioDamiánDeLangheOrellano Ай бұрын
wonderfull!! very good!!
@dbinfotech
@dbinfotech Ай бұрын
Thank you for your support, please subscribe to my channel and share with your friends. Thank you ☺️
@LucioDamiánDeLangheOrellano
@LucioDamiánDeLangheOrellano Ай бұрын
@@dbinfotech I'm just starting out with Gaussian and your videos are very helpful. Thank you very much!!
@LucioDamiánDeLangheOrellano
@LucioDamiánDeLangheOrellano Ай бұрын
@@dbinfotech May i ask you for help with some calculations? Can i write to you on wpp or by email or by any other means of communication?
@Imranasiraz
@Imranasiraz Ай бұрын
After optimization i need to calculate energy. which file i need to choose?
@dbinfotech
@dbinfotech Ай бұрын
Use .log or .out files
@Imranasiraz
@Imranasiraz Ай бұрын
@@dbinfotech thank you bro. Can you make one video how to save log file for further process like UV, energy
@Imranasiraz
@Imranasiraz Ай бұрын
After optimization. We need to use that log file for other calculations right? Guide me bro
@yisehakg5039
@yisehakg5039 Ай бұрын
Thank you. Subscribed!!
@dbinfotech
@dbinfotech Ай бұрын
Thank you for your support ☺️
@李鑫-e6g
@李鑫-e6g Ай бұрын
Hello, I would like to ask if the Energy (eV) values for H2 and H2O are from your calculations? And are their ZPE and TΔS values experimental data? I ask because I saw in your formula that H2 = G(298.15 K) = E DFT + ZPE + TS(T).
@ayomiwalagedara3959
@ayomiwalagedara3959 Ай бұрын
Instead of materials studio, can we use Vesta for formation of Mono layer
@bobbysolanki005
@bobbysolanki005 Ай бұрын
very helpful
@dbinfotech
@dbinfotech Ай бұрын
Thank you for your comment, Please subscribe to my channel and share with your friends. Thank you
@martinradol
@martinradol Ай бұрын
great, help me to calculate free energy for quantum espresso calculation for CO2RR
@KobeGree
@KobeGree Ай бұрын
Great work.And how to get your script
@dbinfotech
@dbinfotech Ай бұрын
You can find it description box 📦
@dbinfotech
@dbinfotech Ай бұрын
Please subscribe to my channel thank you
@KobeGree
@KobeGree Ай бұрын
@ Sorry, Is description box a website?or others?
@dbinfotech
@dbinfotech Ай бұрын
Every KZbin video, have description section below to the video, please check
@KobeGree
@KobeGree Ай бұрын
@ Thank you ,your video is helpful for me
@ayomiwalagedara3959
@ayomiwalagedara3959 Ай бұрын
Can we follow the same procedure for 2D perovskite materials as well
@dbinfotech
@dbinfotech Ай бұрын
You can visit vaspkit.com for more information, they have mentioned different kind of materiel and follow.
@Everson_Code
@Everson_Code Ай бұрын
Great
@swagotomsarkar2994
@swagotomsarkar2994 Ай бұрын
Dear Sir, Does it contain one unpaired electron?
@BaraniKumar-q4e
@BaraniKumar-q4e Ай бұрын
Thank you sir,yoou have explained for single atom for compounds how could we calculate the surface energy?
@artisharma3242
@artisharma3242 Ай бұрын
How we can find enthalpy by using guassian software??
@chiranjeevmishra8419
@chiranjeevmishra8419 Ай бұрын
Can you provide link to its follow up video where you create the heterostructure?
@dbinfotech
@dbinfotech Ай бұрын
How to Modify Environment variable in VASPKIT to Build Heterostructure kzbin.info/www/bejne/i4e0l4Cwl5unY6M Making Au/MgO-100 surface Heterostructure using VASPKIT - PART 2 & 3 kzbin.info/www/bejne/rIa3qKV5Zptlj8k Making MgO (100) and Au (100) surface using Material studio to build Heterostructure - PART 1 kzbin.info/www/bejne/gZq6eqaEfKmpl6s
@chiranjeevmishra8419
@chiranjeevmishra8419 Ай бұрын
@ thanks and keep up the good work😇
@kratijoshi4341
@kratijoshi4341 Ай бұрын
Thank you sir for this clear and nicely explained tutorial. Will you be able to provide a tutorial for HER at different pH? It will be of great help
@satheeshm2234
@satheeshm2234 Ай бұрын
Hi Sir, I am doing PhD in computational chemistry(DFT) using VASP. I have a few questions, so could you please provide your email ID or any other source for me to contact? It would be a great help since I am at the beginning stage of this DFT study.
@hafizmahmoodulhasan1838
@hafizmahmoodulhasan1838 9 күн бұрын
hello, bro, i am student of phd chemical engineering, I want to learn the vasp? can you please help me to learn from basics
@hafizmahmoodulhasan1838
@hafizmahmoodulhasan1838 9 күн бұрын
can i get your contact if feasible please let me know.
@anila5561
@anila5561 Ай бұрын
Can we take Contcar from SCF calculation and then corvert it to POscar and do the next steps