Hi Guru. How can find medical image segment dataset to add my AI educated model?
@pycad5 күн бұрын
Hello, There are several sources for datasets, you can find some interesting ones here: zenodo.org/records/6802614 and here: medicaldecathlon.com/
@GÜRBÜZAKÇAY-o2t5 күн бұрын
@@pycad Thank you so much.
@derekwang598228 күн бұрын
Great tutorial. Thank you.
@Jkjk-pu2vtАй бұрын
i think i found heaven
@daniell9062Ай бұрын
Thoughts on PyVista?
@pycadАй бұрын
Not bad!
@AbuzarbhuttaGАй бұрын
Github link of this code please!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
@moncefhamiani9658Ай бұрын
انا فخور بك ولد بلادي ، انا طالب هندسة بيوطبية حاليا ، عندي مشروع التخرج سرطان التدي ، اتمنى ان اجد فرصة للتواصل معك لأنه عندي بعض الاسئلة حول هدا الموضوع ، و شكرا
Can I use the same monai method from 05:07:32 to change the intensity scale in mammographies? I am trying go use cbis-ddsm for breast lesion classification, but getting poor results no matter the pre trained model chosen. I was wondering if windowing before cropping the images would give me better results. Thank you for the video! Wish I had seen it before.
@redavenskauskaite440Ай бұрын
Is there a way to convert a nifti file with multiple labeled masks into dicom-rtstruct ?
@kasperstarzec7724Ай бұрын
Hi there! Thank you so much for the video! Its exactly what i needed! I was wondering whether it would be possible for you to upload the abdomen stl from the beginning of the video. Its exactly ahat i need for my project and i cant find anything similar! Thanks in advance! 0:11
@pycadАй бұрын
Hello Glad that it helps! I didn’t understand your question, can you please give me some details !
@kasperstarzec7724Ай бұрын
Thanks for your response. At the beginning of the video, you are showing 2 different rotating models in the introduction. The first one is a green 3d image and the second is a 3d image of a human torso with the ribs and hip bones. I was wondering if it would be possible for you to direct me where I could download the 3d file of the human ribcage and hip bone image. Thank you! @pycad
@pycadАй бұрын
Actually that was a CT scan from the Decathlon dataset!
@ezhil182020Ай бұрын
Can you please share the dataset you have used in this video for the viewers to practice along as you code ?
@pycadАй бұрын
Please find the whole dataset here: medicaldecathlon.com/
@iNTERnazionaleNotizia589Ай бұрын
Salaam Mohammed, I don't know if you've come across this in your medical imaging journey: Do you know any (the name) of Dataset for Coronary Artery Disease segmentation? Especially for calculating/predicting the Coronary Artery Calcium (CAC) Scoring? Edit: for CT Image modality of Heart
@pycadАй бұрын
Salem, Unfortunately, I didn’t see this kind of dataset for the moment!
@karthis5375Ай бұрын
Can anyone tell me how to download the image files
@pycadАй бұрын
Please find the whole dataset here: medicaldecathlon.com/
@uniqueramya3632Ай бұрын
Thanks for the informative session. I am unable to find your free eBook. Please can you share the link for the same? in the pycad website it just shows some topics but ebook is not visible.
@pycadАй бұрын
Please find the ebook at this link: www.dropbox.com/scl/fi/8b2don385sndu7dujrwkc/Medical_Imaging_Ebook_Beginners_Guide.pdf?rlkey=ccjo4aa100beyaobvjjjiwllq&st=l2gtkfjb&dl=0
@dr.mahavirsovitkar396Ай бұрын
Cant able to download from above links click here option
@pycadАй бұрын
Please download the ebook from here: www.dropbox.com/scl/fi/8b2don385sndu7dujrwkc/Medical_Imaging_Ebook_Beginners_Guide.pdf?rlkey=ccjo4aa100beyaobvjjjiwllq&st=l2gtkfjb&dl=0
@pycadАй бұрын
Please download the ebook from here: www.dropbox.com/scl/fi/8b2don385sndu7dujrwkc/Medical_Imaging_Ebook_Beginners_Guide.pdf?rlkey=ccjo4aa100beyaobvjjjiwllq&st=l2gtkfjb&dl=0
@GamerPro-qs1pyАй бұрын
How to get the output?
@pycadАй бұрын
What output ?
@zozozainab49092 ай бұрын
hi, how can convert csv dataset file to nifti
@gamedeviitian36452 ай бұрын
Please give code to run with gpu
@InfotainmentAsh2 ай бұрын
Aslam o Alaikum I am PhD Computer Science student having some trouble with finding problem out of Literature Review! How can I contact you?
@samuelarturotorresorozco14712 ай бұрын
Hello! Thanks for the tutorial Someone knows where can I find the slice.dcm file?
@MuhammadMaab-os1gu2 ай бұрын
can we get the stl viewer download link
@pycad2 ай бұрын
Hey, all the three demos code can be found here: github.com/amine0110/spine-segmentation-nnunet/tree/main/demos
@tiempoveganoprovida22472 ай бұрын
Sirve para una frecuencia fija o se puede variar la frecuencia de entrada ???
@Neerajkumar-du8ek2 ай бұрын
Sir, I tried multiple dicom images, but every time matrix of dicom_array all the elements i found is zero, why. in your video there is always some values. In spite of this when I run the program Image appear. Please guide me in this.
@El_Remolino193 ай бұрын
can you paste an image into a dicom image? I am trying to put a qr code into the dicom image, and thought i could simply do it by manipulating the pixel data. Even after converting the qr to the corrrect byte type and color space, i get some werid results
@dougwilson13933 ай бұрын
Using vtk 9, works great. Thanks so much.
@MackintoshOlive-k7w3 ай бұрын
Bergnaum Roads
@EduardoPonce-y4p3 ай бұрын
Altenwerth Rue
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Kihn Spurs
@RachelBryant-x5z3 ай бұрын
Douglas Tunnel
@vikkibinnar86153 ай бұрын
Good job brother😊
@El_Remolino193 ай бұрын
how would you add a qr code or image to a dicom image/file? i want to put one in the right hand corner and have it work
@El_Remolino193 ай бұрын
how would you add a qr code or image to a dicom image/file? i want to put one in the right hand corner and have it work
@LauraThomas-i3o3 ай бұрын
Clark William Wilson Jeffrey Thompson Jason
@HaggaiAsa-y2l3 ай бұрын
Block Point
@DavidLewis-g3e3 ай бұрын
Toy Heights
@BroadMirabelle-t1h3 ай бұрын
Wilderman Forges
@zgscns-e4x3 ай бұрын
Kuvalis Crossroad
@GwynethClinkingbeard-n3e3 ай бұрын
Landen Harbors
@ZOBAER4963 ай бұрын
Which software do you recommend for dicom to nifti conversion? Or do you recommend writing custom Python code to do that?
@pycad3 ай бұрын
Actually both ways work, here are the two resources that we have: 1. In 3D Slicer: kzbin.info/www/bejne/g2bFYaxsh51jl5Isi=zCP73mPYO2E1fhfy 2. By code: pycad.co/how-to-convert-a-dicom-series-into-one-nifti-file-python/
@GeorgeKowalski3 ай бұрын
course is gone , did it move elsewhere ?
@pycad3 ай бұрын
Hey, the course is available in KZbin: kzbin.info/www/bejne/hF6WXnSFippnr6csi=FNfxT2XnN4QovL8G
@rafulsanchezm3 ай бұрын
Bro, I am starting my master degree in AI, in Mexico, I am very interested in the Image Processing application using Python. Is there any course that you sell, to learn more about this topic?
@pycad3 ай бұрын
Unfortunetely we don't courses about this specific topic, all our resources are in the KZbin channel or in our blogs: pycad.co/blog/
@gabriellopez8124 ай бұрын
Gracias! Nice explanation!
@HasanŞEN-k2b4 ай бұрын
Hello, at first thank you for this course. I couldn't find slice.dcm file in this video. Can we access the dataset in this course?
@chih-yunlotmu46694 ай бұрын
Thank you for this course, it will help me a lot !
@rafulsanchezm4 ай бұрын
Great work bro!! Do you know the easiest way to convert from .nii.gz to .nii for image processing? Anothers question is if you have any full course about this?
@pycad4 ай бұрын
Actually .nii.gz is just a compressed version of the .nii format! It is a gzip compression. There are several ways of decompressing, either you use the gzip library or you load the nifti using nibabel oe simpleitk and then you export it again without giving .gz if the output filename. I hope that this helps
@rafulsanchezm3 ай бұрын
@@pycad Thank you
@YoavNadu4 ай бұрын
thanks!
@DeepuThomas-n9v4 ай бұрын
Do you know how to read the measurements taken by Doctor which is shown on the Dicom image? These values seems to be part of the image and not stored in any of the Attrib values in the Dicom file(unlike values like patient name etc).
@setayeshk10624 ай бұрын
your video and code are mostly the same as kzbin.info/www/bejne/g2S9iJmXoryleK8
@maabkhattak84005 ай бұрын
I used this process for brain tumor .I used the exact same process and got in_channels=4..i have train volume dimensions=(1,4,128,128,155) Test volume dimensions=(1,4,128,128,155) train label dimensions=(1,1,128,128,155) Test label dimensions=(1,1,128,128,155) I got error:error using forward pass.size of tensor must be match except in dimension 1.expected size 39 but got size 40 for tensor number 1 in the list