Sir please can you post more videos related your work in english.
@playstation4nobplayer8922 ай бұрын
Thank you for your video, and I really enjoy and successfully plotted the graph through the tutorial. Anyway, if I apply it to the real work, I would like to know how you calculated the aboundancy %?
@sunirmalsheet95443 ай бұрын
Thank you for your video. Could you tell the how to get the mean abundence percentage table?
@safiyayakubu22195 ай бұрын
Amazing video. Thank you for sharing. Please make more of these videos on microbiome analyses. e.g beta diversity, pcoa, NMDS, community heat map, serial group comparisons etc
@justicetresorngomngom68226 ай бұрын
Hi Thank you for your video, please i would like to know the metagenomic analysis tool that you used and why your OTU ID are coded because mine are long numeric number and i used QIIME2
@grazieleruas7 ай бұрын
Gracias
@gamraoueslati69148 ай бұрын
Thank you for the video. I just would love to know who you imported the data, and if it should be tsv format? Thanks
@sur93628 ай бұрын
All the data and code is the github repo github.com/surh/scip_barplot The data is in tsv format so I used the read_tsv function of the readr package
@meseretmuche69848 ай бұрын
remarkable lecture Dear Dr, please share us if you have video lecture related to indicator species analysis in r
@user-dp7fj5qd1d9 ай бұрын
Thank you for your teaching and sharing. It helps me a lot. Really appreciate.
@abimbolaenitan12910 ай бұрын
How can I get the diversity based on this?
@rishikeshdash1210 ай бұрын
Can you tell me which package can be used for prevalence calculation for Microbiome Data.
@gustavsloris11 ай бұрын
amazing, thank you! combining all the metabarcoding data in one large table and visualizing with ggplot is much more handy to work with than phyloseq. best regards :)
@dianamamawal466411 ай бұрын
Hi what if i have 50 legends? Cannot do it with rcolorbrewer and rainbow color is not that presentable.
@cristianjaviermena6955 Жыл бұрын
Gracias por este video hermanoo!! no tiene abuela este cientifico!!!
@ginalaspada3521 Жыл бұрын
😃thank you
@sofiahernandezvivar6893 Жыл бұрын
Thank you so much for this video!! so clear
@amrsalaheldinabdallahhammo663 Жыл бұрын
How to plot the relative abundance of the most abundant genera (with a mean relative abundance > 1% in all samples? please
@TheSalinascrime Жыл бұрын
How were you able to obtain the mean abundance to be able to reorder the Phylum?
@sur9362 Жыл бұрын
There is more than one way to do it. You can see how I did it in the extended_example.Rmd file of the GitHub repo. Or go to this link github.com/surh/scip_barplot/blob/a775e0d97b47e8dd40498b6713016bbb7e045003/extended_example.Rmd#L285-L301
@user-zc6bv8ej9g2 жыл бұрын
Thank for the vdo. Please keep this type of tutorial vdo coming.