Association mapping using TASSEL

This chanel develops and host various educational videos in the field of agriculture and applied genomics which will help for the students, teachers, scientists and seed industry personals for easy understanding of the various techniques applied in the field of crop genomics. The scientist working in various seed industry and teachers of various crops based genomics applications can use the videos as teaching aid. The young professionals started their carrier in the field of marker assisted breeding programme can use this videos to solve the various technical issues in thier day to day field problems

[@nirubanav9260]

Nice video. Useful for diversity and association analysis

[@manikandanvediyappan4561]

well explained about Tassel software running... useful and informative vedio

[@reenamaqsood2675]

Hi i am working on TASSEL software for association mapping using SSR markers. when we have polymorphic allele means A,B,C,D or more with which numbers we should denote these alleles. Secondly what do u mean by number of components because when i reach on this step and do PCA software get struck and does not give any result.

[@amitkumarpradhan4681]

Can You kindly reply to this query I am having the same issue of arranging genotypic data with polymorphic allele

[@wbsimey]

wonderful tutorial, but I am using TASSEL 5.2.64 and the transformation step of genotype data is no longer an option. The new and equivalent option under the "Data" menu is called "Numerical Genotype". But, I cannot find an option for the second transformation using PCA. Any recommendations?

[@shasidharyaduru3016]

Nice and simple thank you

[@Janerajakumai]

Well explained & useful one.

[@pavithrans6946]

Leaned to work with the software.Thank you.

[@hafizumar4083]

I am using TASSEL first time when I upload my file on TASSEL, I am getting an error. I don't know how to fix it? Can you please help

[@vadivelkulanthaivel3699]

good experience this videos.

[@nithya3557]

useful and informative video

[@abinayasree2987]

TASSEL software had been well explained

[@ehsanshakiba]

Nice video! Thank you!

[@crazyhappyrea]

Thanks for this tutorial. But I've experienced a problem with the locus. Even though I use a map, the loci remains unknown. I was wondering if you know how to format the input file so that the locus position would appear.

[@Monisresidence]

nice video..

[@iniyaal9831]

informative video

[@sarankumar1667]

nice and explains how to use the softwere

[@valarmathisri6684]

nice video

[@jeanrodriguesangare8261]

Hi , I noticed that you have chosen 1 for a parent allele and -1 for the other parent allele , what about heterozygous allele ???

[@Debora_Santo]

In this system, heterozygous calls would usually be marked with zero.

[@GayathriMani1293]

well understood!!!

[@samyuktha1291]

Nice

[@zelekewondimu4349]

Thanks for the video. I am a kind of person with no exprience in association mapping but would like to conduct few research that involves AM. Would you please help me in this regard?

[@hchen1851]

I think this video deserves to get citated. lol

[@amitkumarpradhan4681]

Can you kindly explain the excel data format used here.

[@sreenivasshrihaan1318]

CAN YOU PROVIDE SOFTWARE OF TASSEL VERSION 4.0

[@priyankarajendran9421]

nice video