BLAST

  Рет қаралды 24,620

RobEdwards

RobEdwards

Күн бұрын

Пікірлер: 12
@vitekllc694
@vitekllc694 4 жыл бұрын
Best video I've seen on this - Thank you !!
@rupindersayal
@rupindersayal 5 жыл бұрын
Great, clear explanation of BLAST algorithm! Thanks for sharing ~!
@rowlandpettit1937
@rowlandpettit1937 4 жыл бұрын
Nice explanation. Thank you!
@liamcheney9310
@liamcheney9310 5 жыл бұрын
Nice and clear explanation! Thanks for the video :)
@abdullahgarra8477
@abdullahgarra8477 2 жыл бұрын
Life saver!
@casual_cupcake
@casual_cupcake 9 жыл бұрын
Great video, well explained. This helped me a lot. Thank you.
@richardaugimeri4728
@richardaugimeri4728 8 жыл бұрын
Very helpful thanks!
@YAKYAKYAK90
@YAKYAKYAK90 8 жыл бұрын
Explanation of p-value is not correct (P(score|random)=/=P(random|score)). It's just the probability that if your sequences were not related you would get such a score (or a higher one). Similarly, neither P- nor E-values can (without further information but in any case should) be used to classify as distantly or closely homologous - just use the sequence identity/mean score for that (Consider finding an exact homologue of a short sequence - You will not get high E-values ).
@danielhogan1461
@danielhogan1461 7 жыл бұрын
Good catch on the P-value, but I have to disagree with your second point. The reason you don't get high E-values with short sequences is because there is a high chance the match occurred by chance, and isn't the result of homology.
@YAKYAKYAK90
@YAKYAKYAK90 7 жыл бұрын
Exactly. That Is what I was trying to say (I justed changed "P- nor E-values can NOT be" to "Neither P- nor E-values can be", thanks for the catch)
@alexekeya2773
@alexekeya2773 8 жыл бұрын
Interesting
@chiranjib-konwar
@chiranjib-konwar 7 жыл бұрын
what's wrong with the microphone? it's terrible.
BLAST 1
6:27
RobEdwards
Рет қаралды 26 М.
Statistical Rethinking 2023 - 01 - The Golem of Prague
50:48
Richard McElreath
Рет қаралды 117 М.
1% vs 100% #beatbox #tiktok
01:10
BeatboxJCOP
Рет қаралды 67 МЛН
СИНИЙ ИНЕЙ УЖЕ ВЫШЕЛ!❄️
01:01
DO$HIK
Рет қаралды 3,3 МЛН
Genome Annotation
34:35
RobEdwards
Рет қаралды 26 М.
The medical test paradox, and redesigning Bayes' rule
21:14
3Blue1Brown
Рет қаралды 1,3 МЛН
BLAST 9 E values
8:13
RobEdwards
Рет қаралды 12 М.
How to calculate p-values
25:15
StatQuest with Josh Starmer
Рет қаралды 442 М.
Multiple Sequence Alignment
9:49
Bob Lessick
Рет қаралды 173 М.
BLAST 10 Algorithms
6:51
RobEdwards
Рет қаралды 7 М.
Webinar: A Practical Guide to NCBI BLAST
54:45
National Library of Medicine
Рет қаралды 67 М.
How might LLMs store facts | DL7
22:43
3Blue1Brown
Рет қаралды 1 МЛН
Lec 2 | MIT 9.00SC Introduction to Psychology, Spring 2011
1:11:16
MIT OpenCourseWare
Рет қаралды 933 М.
Bloom Filters
11:06
RobEdwards
Рет қаралды 17 М.