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The ligand should be prepared molecular docking using autodock, this is called ligand preparation. This video shows how to perform energy minimisation using openbabel. openbabel has many forcefields like MMFF94, UFF, GAFF, GHEMICAL. this requires openabel to be installed in the system.
Playlists
Autodock: • How to install Autodoc...
Computer Aided Drug Design, Docking • Computer Aided Drug De...
Pymol Tutorials • Pymol Tutorials