Extracting radiomics features in 3D Slicer tutorial

  Рет қаралды 4,521

Psychosensing Lab PSNC

Psychosensing Lab PSNC

Күн бұрын

3D Slicer (www.slicer.org/) is an open source software for medical image analysis and visualisation. In this video we demonstrate how to prepare segments as 3D radiomics objects. We also show how to extract segment features. We used the open source Cancer Imaging Archive (TCIA) dataset available at wiki.cancerimagingarchive.net....
Timestamps:
0:28 Installing required plugins
1:12 Loading data
1:51 Regions segmentation
2:51 Generating segment 3D image
3:47 Saving segments
4:20 Extracting radiomics features
6:07 Saving features table
The segmentation performed in 3D Slicer allows each segment (possibly of a malignant tissue) to be stored in a separate file, making feature extraction much faster and easier. This is a step towards the further development of quantitative radiomics.
License: the Cancer Imaging Archive (TCIA).

Пікірлер: 9
@mikolajbuchwald
@mikolajbuchwald 2 жыл бұрын
Great, clear, step-by-step example, that includes both: installation and using the module
@user-hp2fl9er5x
@user-hp2fl9er5x 4 ай бұрын
Thank you! You cant even imagine how valuable your video is!!!
@mikolajbuchwald
@mikolajbuchwald 4 ай бұрын
Thank you! We slowly begin to relize, once we started visiting other laboratories ;)
@revathysuresh942
@revathysuresh942 Жыл бұрын
Such a great video, thank you so much.
@psychosensing
@psychosensing Жыл бұрын
Glad you liked it! At the moment we are more into some analyses, but more such videos can follow in the future :)
@Arnab913
@Arnab913 Жыл бұрын
Excellent tutorial!
@psychosensing
@psychosensing Жыл бұрын
Thank you @Arnab913 !
@ffarzane9245
@ffarzane9245 Жыл бұрын
It is a great tutorial. Thanks alot.
@psychosensing
@psychosensing Жыл бұрын
Your welcome!
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