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This video tutorial explains protein-ligand docking using Chimera and AutoDock Vina tool. The target molecule was retrieved from the RCSB PDB and ligand molecule from the NCBI PubChem database. Public URL for the sources and tools are below,
RCSB PDB - Database for macromolecules
www.rcsb.org/
NCBI PubChem - Database for small molecules
pubchem.ncbi.n...
Chimera - For molecule manipulation and visualization
www.cgl.ucsf.e...
AutoDock Vina - For protein-ligand docking
autodock.scrip... (OR)
vina.scripps.e... (OR)
github.com/ccs...
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