There is a slight fix in the fit method that must be applied if class labels do not start at 0: for idx, c in enumerate(self._classes) instead of for c in self._classes
@AliHussain-kb3ew4 жыл бұрын
how to solve this problem.what I do. for idx, c in enumerate(self._classes): X_c = X[y==c] self._mean[idx, :] = X_c.mean(axis=0) self._var[idx, :] = X_c.var(axis=0) self._priors[idx] = X_c.shape[0] / float(n_samples) boolean index did not match indexed array along dimension 1; dimension is 5 but corresponding boolean dimension is 1
@alitaangel86504 жыл бұрын
@@AliHussain-kb3ew Above code works fine for me, maybe something is wrong with your input data ?
@Dhanush-zj7mf3 жыл бұрын
I was stucked for 2 days and also posted question in stack overflow I think I should have watched comments first
@robinsonnadar54573 жыл бұрын
@@AliHussain-kb3ew Even I am stuck up with the same error :(
@umarmughal59222 жыл бұрын
@Python Engineer could you please explain how to apply Laplace to this?
@mattgoodman26874 жыл бұрын
Thank you for this. I had no clue how to conceptually grasp Naive Bayes, but after watching your video I understand it very well
@patloeber4 жыл бұрын
I’m glad it is helpful :)
@kougamishinya65662 жыл бұрын
I love the way you explain what each line is doing and relate it back to the formulae, that's super helpful thank you!
@tkaczoro6 ай бұрын
Looks like for the same reason you removed P(X) from formula for y, you can also remove the prior term P(y). You will get the same result in calculation of accuracy.
@vanshikajain83533 жыл бұрын
In the second function predict, under the for loop, there is misplaced x which can be replaced by c in class conditional otherwise you get an exception of ValueError.
@chandank5266 Жыл бұрын
Yeah! Actually I got confused at that point but now its clear. Thanks for confirming :)
@akshaygoel21842 жыл бұрын
Amazing implementation! Small question/point - for the PDF shouldn't the numerator var have a square term? i.e. (2 * var**2)?
@BlackHeart-AI Жыл бұрын
f(x) = (1 / (σ * sqrt(2π))) * e^(-((x-μ)^2) / (2σ^2)) In statistics, σ (the Greek letter sigma) represents the standard deviation of a population. The standard deviation is a measure of the spread or dispersion of a set of data around its mean. Standard deviation is closely related to the variance, which is equal to the square of the standard deviation, and is denoted by σ^2. Just σ^2 == variance
@Fresh290PL2 жыл бұрын
Great video, thanks! Just one thing - how we can avoid the zero-frequency problem in this implementation?
@matthewcallinankeenan20343 жыл бұрын
@PythonEngineer I'm using this on a large dataset with 8 columns and ~16000 rows. Its saying 'IndexError: index 10000 is out of bounds for axis 0 with size 210" Do you know how I can fix this?
@matthewcallinankeenan20343 жыл бұрын
What do we change about this program if the class isn't just True/False eg self._classes isn't just [0,1]
@patloeber3 жыл бұрын
It works for multiple classes, however you have to change the for loop like this: for idx, c in enumerate(self._classes): In my gitHub repo I already updated this fix....
@andreaq.y17704 жыл бұрын
very good tutorial !!! hope you will update more about algorithm implementations
@patloeber4 жыл бұрын
Thank you! Yes more videos are coming soon :)
@posadzd73433 жыл бұрын
Good video, learnt a lot, please can you implement Bayes-classifier based on parzen window density estimation?
@abhisheksuryavanshi979 Жыл бұрын
No init function inside the NaiveBayes class?
@heidycespedes9220 Жыл бұрын
Awesome explanation! It helped me to understand the concept and work on my project. Thanks a lot!
@Lanipops4 жыл бұрын
Tried to run this but i keep getting this error: ~/anaconda3/envs/XXXXXX6/aima-python-master/naivebayes.py in fit(self, X, y) 15 for c in self._classes: 16 X_c = X[y==c] ---> 17 self._mean[c, :] = X_c.mean(axis=0) 18 self._var[c, :] = X_c.var(axis=0) 19 self._priors[c] = X_c.shape[0] / float(n_samples) IndexError: only integers, slices (`:`), ellipsis (`...`), numpy.newaxis (`None`) and integer or boolean arrays are valid indices
@omkarpatil43864 жыл бұрын
make your labels binary or encode the labels .
@ramazanburakguler5842 Жыл бұрын
In terms of regularization, what can be done?
@ozysjahputera76692 жыл бұрын
The pdf implemented here is only for univariate gaussian, correct? Multivariate would have involved covariance matrix inverse, and determinant. Never mind. You assume all features are independent of each other.
@jossyrayonieram52312 жыл бұрын
Hi. What do you mean by "classes" here. You mention classes "0" and "1", but still not sure what you meant or why they are called "classes".
@changsinlee46343 жыл бұрын
A great tutorial and implementation. Just one correction on the implementation. _pdf is implemented differently than the formula. It should be: numerator = np.exp(- (x-mean)**2 / (2 * var**2)) denominator = np.sqrt(2 * np.pi * var**2) The implemented code is missing the squared part. numerator = np.exp(- (x-mean)**2 / (2 * var)) denominator = np.sqrt(2 * np.pi * var)
@patloeber3 жыл бұрын
thanks for the feedback. but you are wrong, you may have confused standard deviation and variance. in most formulas (and this video) it is written with the squared standard deviation, which is equal to the variance (so no square when using the variance directly) :)
@changsinlee46343 жыл бұрын
@@patloeber Thanks for the quick reply. Ah, yes, I see it. In that case, it should be std**2. You get different values based on whether you use var or std**2. I was comparing the results with those of the standard library (from scipy.stats import norm ) and that's when I discovered the differences.
@patloeber3 жыл бұрын
@@changsinlee4634 oh this is interesting. Thanks for noticing this! I would expect that std**2 and var are exactly the same except for rounding errors
@MuhammadAli-pf4ww2 жыл бұрын
Can anyone explain what X_c = X[c==y] is doing? I'm a little confused
@amauryribeiro18604 жыл бұрын
just... thank you !! for your help! ^^
@patloeber4 жыл бұрын
You are welcome!
@dinarakhaydarova48982 жыл бұрын
exactly what i needed! thank you bunchesss
@OnlineGreg2 жыл бұрын
hey, thanks a lot for this series. One question: why do you often put an underscore _ in front of a function or a variable?
@derilraju21062 жыл бұрын
It's a general way to describe private methods which need not be called in the main function
@shehanjanidu23343 жыл бұрын
I was using my own csv file as my dataset but it gives ufunc 'subtract' did not contain a loop with signature matching types (dtype('
@samii81042 жыл бұрын
So i'm trying to run the algorithm for a dataset which have features for y_train first half 0 and second half 1. The problem is that when im trying to get the predict for the first half of y_train im getting error of dividing with 0. Is there anyway using laplace in the code help me???
@abhisheksuryavanshi979 Жыл бұрын
can anyone pls tell why are we adding prior+class_conditional variables?
@srikaramanaganti12853 жыл бұрын
can you model class conditional probability using Multinomail distribution
@anjaliacharya95064 жыл бұрын
I try to implement this in wbcd dataset but getting an error in the line " numerator = np.exp(- (x-mean)**2 / (2 * var))" UFuncTypeError, could you help me with this
@anjaliacharya95064 жыл бұрын
I have used label encoder to change 'diagnosis' target column to integer type but the error persists in the same line I mentioned. UFuncTypeError: ufunc 'subtract' did not contain a loop with signature matching types (dtype('
@jonn68974 жыл бұрын
I have the same error with another dataset, looking forward to any help!
@anjaliacharya95064 жыл бұрын
@@jonn6897 I tried converting all columns with feature except target to numpy array for probability calculation, then it works. In my case it is WBCD dataset. y = wbcd_data.diagnosis X = wbcd_data.drop('diagnosis',axis=1) X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2) #convert all columns with feature except target to numpy array to calculate probability X_train = np.array(X_train) X_test = np.array(X_test)
@patloeber4 жыл бұрын
try casting your x to dtype=np.float64 before calling fit(), and yes of course it must be a numpy array
@robertrey70022 жыл бұрын
Hey man that was a great tutorial! I would just like to ask however, is there a way to know when you should use the Naive Bayes classifier?
@no_guarantees2 жыл бұрын
Simplest application would be a binary classifier (0/1) or (no/yes) such as spam classification. You could experiment with NB where you would typically use logistic regression to build your intuition.
@user-tp7ry2sf4l3 жыл бұрын
Thank you so much friend, very helpfull
@patloeber3 жыл бұрын
Glad you like it!
@BlueSkyGoldSun Жыл бұрын
Any book you recommend to learn ml in native python?
@FoodieTechVoyager3 жыл бұрын
Hi, I am new to Machine learning, it would be very helpful if you could provide the dataset too , or share a tutorial on how to create that
@patloeber3 жыл бұрын
thanks for the suggestion
@tanziahkhanam64513 жыл бұрын
I got very less accuracy for my own dataset. Accuracy only 0.3 , what is the reason? And also got warning, RuntimeWarning: divide by zero encountered in true_divide numerator = np.exp(- (x - mean) ** 2 / (2 * var))
@bong-techie2 жыл бұрын
how did you fix it, i'm facing the problem now, please help[
@_Shrivi_4 жыл бұрын
Hi, very good explanation . Can I use this code to train data for sentiment analysis as well?
@patloeber4 жыл бұрын
yes
@kidspast72942 жыл бұрын
Great tutorial thanks!
@AliHaider-hg7lj4 жыл бұрын
How can we train any model on it? I mean if we have a csv file so how can we use it on this model?
@patloeber4 жыл бұрын
load the data with pandas or just manually with open(filename) and convert each line to your x and y vectors. then create training and testing data and train your model
@patloeber4 жыл бұрын
I'm actually planning to release a short video in the next 1-2 days on how to load your own datasets from csv
@AliHaider-hg7lj4 жыл бұрын
@@patloeber Perfect & Thanks:)
@T4l0nITA4 жыл бұрын
data = pandas.read_csv("file_name.csv") X = data.iloc[samples, features].values y = data.iloc[samples, y_column].values
@joydeepkr.devnath1934 жыл бұрын
Hi, great video btw...1 question at 4:43, where you define P(x_i|y) = Gaussian formula..but the Gaussian pdf is a distribution, so to get the probabilities we need integration. So, do we approximate this integration as area inside the rectangle having height=pdf and breadth = some delta. So, since we have a ratio of probabilities in the Bayesian formula, so the numerator delta cancels the denominator delta. So, that is why we dont include that delta term in our formula. Is this how you are doing ?
@patloeber4 жыл бұрын
This is a very good question! I hope this helps: stats.stackexchange.com/questions/26624/pdfs-and-probability-in-naive-bayes-classification
@joydeepkr.devnath1933 жыл бұрын
@@patloeber yes this link was helpful. Thanks !
@patloeber3 жыл бұрын
@@joydeepkr.devnath193 sure :)
@bryanchambers19643 жыл бұрын
Hey there, I like your videos you explain well but I am confused about something. There is a step in your code where you have: for c in self.classes: X_c = X[c==y] I understand the first line in the code (for c in self.classes:), but I have no idea why you have X_c = X[c==y]., if my c values are for example [ 1, 4, 8] , then X_c = X[1==1] just gives me X_c with an extra dimension. For example if X is a 3x4 matrix, X_c is now the same matrix except it has dimension 1x3x4. Am I just dumb or overthinking this detail?
@patloeber3 жыл бұрын
Note that y is an array as well, not just a number, and the length of y has to be the same as the first dimension of X! So X_c[1==y] gives you all rows of X where y is 1. Please note also that my code has a slight but. It should be this (compare with my code on Github): for idx, c in enumerate(self._classes): X_c = X[y==c] self._mean[idx, :] = X_c.mean(axis=0)
@bryanchambers19643 жыл бұрын
@@patloeber Thanks, yeah I kind of realized this after a while. So, this will extract the rows of X that have that class y=1. Makes sense.
@godwingeorgethekkanath3 жыл бұрын
Great tutorial😍 It was useful for me.
@patloeber3 жыл бұрын
thanks, glad you like it!
@prithviamin68474 жыл бұрын
hi i'm getting this error: UFuncTypeError: ufunc 'subtract' did not contain a loop with signature matching types (dtype('
@patloeber4 жыл бұрын
Try converting your data to np.float. And check if all your data is valid, probably you have NaN for some data points...
@AliHussain-kb3ew4 жыл бұрын
Hi, I face a Same problem ,you got it right. if correct the code please suggest me what I do.
@AliHussain-kb3ew4 жыл бұрын
Hi
@T4l0nITA4 жыл бұрын
Really good explanation.
@patloeber4 жыл бұрын
Thanks!
@prateekarora45493 жыл бұрын
very good tutorial !
@kritamdangol53494 жыл бұрын
I got this errror while performing run .Please provide me solution for this. line 54, in predicted_values=(model.predict(Features_test)) line 20, in predict y_pred=[self._predict(x) for x in X] , in y_pred=[self._predict(x) for x in X] line 29, in _predict line 40, in _pdf numerator=np.exp(-(x-mean)**2/(2*var)) numpy.core._exceptions.UFuncTypeError: ufunc 'subtract' did not contain a loop with signature matching types (dtype('
@patloeber4 жыл бұрын
probably your datatype or the shape of your vector is not correct. try casting to np.float32
@kritamdangol53494 жыл бұрын
@@patloeber Thank u !
@debatradas92682 жыл бұрын
thank you
@seyeeet80634 жыл бұрын
so NB does not have any updating rule like gradient decent?
@patloeber4 жыл бұрын
No you just have to pre calculate priors and mean and var, and then apply the formula using Bayes‘ theorem
@viperz3014 жыл бұрын
Hi! what do you mean by the self that you pass into every function? is it the data frame?
@patloeber4 жыл бұрын
This is an essential concept of object oriented programming and using classes in Python. self represents the instance of the class. By using the “self” keyword we can access the attributes and methods of the class in python. It binds the attributes with the given arguments.
@jossyrayonieram52312 жыл бұрын
@@patloeber out of all the things Python does for you automatically, they stopped with "self". >_
@nafesafirdous36704 жыл бұрын
If I have my on dataset which is not present in sklearn datasets then how can I make classification? please help!
@patloeber4 жыл бұрын
You need to load the dataset (probably from a csv file) and setup your X and y numpy arrays
@nafesafirdous36704 жыл бұрын
@@patloeber Helpful Thanks
@amitupadhyay65113 жыл бұрын
what if the values in _pdf matrix are inf, then?
@patloeber3 жыл бұрын
then you have a problem ;) yeah you should add some error checking and maybe clip the allowed range in the calculation
@boooringlearning3 жыл бұрын
great video!
@patloeber3 жыл бұрын
Thanks!
@nobody29372 жыл бұрын
Also, make sure var is NOT 0 ...
@marcosraphael33904 жыл бұрын
This is an unlabeled classifier?
@patloeber4 жыл бұрын
No, it is supervised learning
@madsmith135211 ай бұрын
Guass.. rhymes with house..
@AliHussain-kb3ew4 жыл бұрын
How to use this code in python Anaconda ?,
@patloeber4 жыл бұрын
I have a tutorial for Anaconda setup
@Lanipops4 жыл бұрын
need to make the naive bayes file allow 2d array
@patloeber4 жыл бұрын
try to cast y to int before fitting the data: y = y.astype(np.int)
@tsotnegams4 жыл бұрын
In the pdf method you wrote (2*var), it should be(2*var**2) because of squared variance in the formula. Great tutorial otherwise.
@patloeber4 жыл бұрын
No. The formula shows the squared standard deviation, which is equal to the variance (small sigma is always used in statistics for standard deviation). probably i should have pointed this out better. thanks for watching :)
@tsotnegams4 жыл бұрын
@@patloeber You are right, thanks for the reply.
@patloeber4 жыл бұрын
No problem :) you can always reach out when you have questions or find different errors
@AliHussain-kb3ew4 жыл бұрын
I try to Run this code on Anaconda an other iris dataset but ,i face a problen.
@patloeber4 жыл бұрын
Which problem ?
@redhwanalgabri72813 жыл бұрын
('Naive Bayes classification accuracy', 0)
@reellezahl2 жыл бұрын
You need either a better microphone or to better adjust your sound settings. Your volume levels keep crashing and it's very grating on the ear.
@ragaistanto67224 жыл бұрын
Terimakasih. Untuk teman" lainya saya juga ada nih video tutorial ngoding Naive Bayes python 3 bisa di cek barangkali cocok. kzbin.info/www/bejne/o2Grh3ecmpWeb5I