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Deforestation is rapidly altering Southeast Asian landscapes, resulting in some of the highest rates of habitat loss worldwide. Among the many species facing declines in this region, clouded leopards rank notably for their ambassadorial potential and capacity to act as powerful levers for broader forest conservation programmes. Using WildCRU’s region-wide camera trap dataset, we identified core habitat and connectivity corridors and ranked remaining habitat patches for conservation prioritization for the entire ranges of the mainland and Sunda clouded leopard, Neofelis nebulosa and N. diardi.