Analzye Visium High Definition Spatial Dataset with Seurat

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Single Cell Genomics, Transcriptomics & Proteomics

Single Cell Genomics, Transcriptomics & Proteomics

Күн бұрын

Пікірлер: 3
@amnehaoudi
@amnehaoudi 5 ай бұрын
What a beautiful explanation! I really appreciate all your helpful efforts, You are the best! I wish you all the best and looking forward to learning more about spatial transcriptomic analysis in terms of functionality of the cells soon . Thousands of thanks doctor❤
@ankithashetty387
@ankithashetty387 3 ай бұрын
I have multiple biopsies on my visium HD slide with gaps in between them. How do I filter out the bins with low RNA counts?
@Collection_of_online_tutorials
@Collection_of_online_tutorials 5 ай бұрын
### Analysis, visualization, and integration of Visium HD (high definition) spatial dataset with Seurat library(Seurat) library(tidyverse) set.seed(12345) ### Load Visium HD data # www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-libraries-of-mouse-brain-he object
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