FM Index, part 2: efficient matching

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Ben Langmead

Ben Langmead

Күн бұрын

Пікірлер: 6
@AmitKumar-yd1cp
@AmitKumar-yd1cp 4 жыл бұрын
Wonderful concept. Thank you.
@xdrtrey1094
@xdrtrey1094 7 ай бұрын
Hmm...maybe I don't get something here but...why are you using this visualization to explain the operations? With the previous video on wavelet trees, I was expecting an explanation with a visualization of a huffman shaped wavelet tree. I think this would communicate the connection between BWT, Huffman codes and wavelet trees better. Correct me if I'm wrong but aren't 'modern' implementations only storing the Huffman shaped wavelet tree of the bwt and nothing else, not even the C array?
@faivelfedullosilva3958
@faivelfedullosilva3958 4 жыл бұрын
Excellent content. This is really helpful and well explained. My congratulations and gratitude. Also, I have a question. In bioinformatics, it is usual to try to find a not exact match. Can you tell me which is the best performing method for this kind of query? Thank you very much. I hope you can read my comment.
@faivelfedullosilva3958
@faivelfedullosilva3958 4 жыл бұрын
I just made I little research in you and I notice that you work with biological data, so no need no explain what I try to in my comment!!! I am currently doing my grade thesis in bioinformatics and your content is deeply helpful.
@arpitmathur2933
@arpitmathur2933 3 жыл бұрын
@@faivelfedullosilva3958 same
@jone4428
@jone4428 2 жыл бұрын
At minute 20 the computer corrects 2 for 0, so minute 20.00 what is showing in next range is wrong :P. great presentation
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