Genome Assembly Workflow Tutorial with SPADes | llumina Reads | Bioinformatics 101 for Beginners

[@DaliScience-eq7jv]

Please let me know whether we can do reference guided assembly using spades

[@muhammadakmal1414]

Very well explained. I always enjoy watching your videos.

[@bioinformaticscoach]

Glad you like them!

[@Jersley1987]

Great work Vincent. This is a very useful tutorial for beginners.

[@Jersley1987]

Can you provide an introduction to bioinformatics, it's relevance and the information as well as the tools that can be obtained from bioinformatics analysis.

[@SammyBioinfo]

Thank you for video. I always love to watch your video. While running spades, it's showing me error after running for a while. 'system call for: finished abnormally, OS return value :21 Please what can I do?

[@dejenieshiferaw9352]

Thank you very much, excellent presentation.

[@joycealvarezbarragan6983]

Hello Vincent, great work. I am new in SPADes and Linux so maybe my question will be simple: do you have to load SPADes in the console? I have seen several tutorials and this is the first time I cross with this. Thank you for your help, my program is not working and maybe that is the cause.

[@bioinformaticscoach]

If you have spades installed, then you don't need the module load command

[@kankamukherjee8596]

Man ur videos are awesome

[@maharmibhattacharya2875]

Thank you so much.

[@danielsoenarto1384]

Hi, how do you calculate the total length of the contigs.fasta?

[@bioinformaticscoach]

You can use programs like python to read the file and check the length of each contig. I am currently planning on making a video on that . But in the meantime these videos may help.: kzbin.info/aero/PLe1-kjuYBZ07THLNZtNAyThcl5Qy6NT5J

[@bioinformaticscoach]

One-on-One coaching (Video Conferencing) calendly.com/bioinformaticscoach One-on-One coaching(Audio Call) clarity.fm/vincentappiah

[@siamecourage5842]

Interesting Video