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Save Time: Convert SRA files to fastq files faster!

  Рет қаралды 731

chatomics

chatomics

Күн бұрын

Tool link: github.com/rva...
Learn how to download FASTQ files from GEO, SRA or Sequence Read Archive using a parallel version of FASTQ dump in this video. Save yourself a lot of time for big files with this efficient method. Don't miss out, subscribe to Chatomics for more helpful tutorials like this one!

Пікірлер: 6
@alpeshkapadia7715
@alpeshkapadia7715 Ай бұрын
Can you guide on how to make pipeline for tumor-only samples?
@anubratadas1
@anubratadas1 6 ай бұрын
Thanks for sharing
@chatomics
@chatomics 6 ай бұрын
You are welcome!
@mahewashkhan2035
@mahewashkhan2035 6 ай бұрын
Thank you for sharing. It's very helpful. I have one thing to ask- if I can't add more than 4 threads, then will it take more time to download?
@chatomics
@chatomics 6 ай бұрын
If the file is big, using 4 CPUs will have some speed gain
@mahewashkhan2035
@mahewashkhan2035 6 ай бұрын
@@chatomics okay, thank you for letting me know.
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