Blast: The Algorithm

  Рет қаралды 21,697

PR-INBRE BiRC [Bioinformatics Resources Core]

PR-INBRE BiRC [Bioinformatics Resources Core]

Күн бұрын

Пікірлер: 10
@SonDVo
@SonDVo 3 жыл бұрын
Great video. Explanation with video is far more understandable than reading algorithms in papers (although it can be less comprehensive)
@yoongicorn7973
@yoongicorn7973 Жыл бұрын
I think there is some mistake while building the binary search tree. Like in the left subtree of the root node, we are left with 6 nodes which is even number of nodes. So we select the higher-mid that is "15" as the left child. But for the right subtree, again we get even number of nodes to choose mid from, then we should take "53" and not "40". Don't you think so?
@nickpricekefwjF
@nickpricekefwjF 4 жыл бұрын
Great explanation, but remove annoying music from your videos!!!
@thepierre2009
@thepierre2009 Жыл бұрын
it helps me stay awake
@PedroTorres-mn2jn
@PedroTorres-mn2jn 4 жыл бұрын
Would you care providing references for the implementation of the tree-searching matching in BLAST?
@abdullahfaqihalmubarok8232
@abdullahfaqihalmubarok8232 2 жыл бұрын
really helpful!
@nickpricekefwjF
@nickpricekefwjF 4 жыл бұрын
You have the "Pre-process database" across all slides which is confusing
@yellowspirit9370
@yellowspirit9370 4 жыл бұрын
Excelente video, hacer ver este tema muy claro.
@mahmud8982
@mahmud8982 3 жыл бұрын
please remove the annoying music...
@dimitrismwrakis6910
@dimitrismwrakis6910 4 жыл бұрын
Not good explanation, especially in the search trees and you also have mistakes at the values of keys in the 3-mers within HSSP threshold. For example key for CTC = 29 and not 45. There are alo other mistakes. Sorry man thumbs down!
Heuristic of Blast
8:38
PR-INBRE BiRC [Bioinformatics Resources Core]
Рет қаралды 8 М.
Substitution Matrices: BLOSUM
9:17
PR-INBRE BiRC [Bioinformatics Resources Core]
Рет қаралды 14 М.
Chain Game Strong ⛓️
00:21
Anwar Jibawi
Рет қаралды 41 МЛН
So Cute 🥰 who is better?
00:15
dednahype
Рет қаралды 19 МЛН
Try this prank with your friends 😂 @karina-kola
00:18
Andrey Grechka
Рет қаралды 9 МЛН
How Strong Is Tape?
00:24
Stokes Twins
Рет қаралды 96 МЛН
2. Local Alignment (BLAST) and Statistics
1:16:48
MIT OpenCourseWare
Рет қаралды 124 М.
BLAST 1
6:27
RobEdwards
Рет қаралды 25 М.
global sequence alignment
14:28
Deborah Thurtle-Schmidt
Рет қаралды 112 М.
Understanding Sequence Alignment Algorithms: with Needleman-Wunsch
12:12
Professor Hendrix
Рет қаралды 56 М.
BLAST 9 E values
8:13
RobEdwards
Рет қаралды 12 М.
Substitution Matrices: PAM
8:42
PR-INBRE BiRC [Bioinformatics Resources Core]
Рет қаралды 9 М.
Multiple Sequence Alignment
13:05
Bioinformatics Algorithms: An Active Learning Approach
Рет қаралды 69 М.
BLAST Algorithm Explained
11:40
LiquidBrain Bioinformatics
Рет қаралды 23 М.
BLAST
21:12
RobEdwards
Рет қаралды 24 М.
Database Similarity Searching- BLAST & FASTA
22:46
Gene&Tech
Рет қаралды 18 М.
Chain Game Strong ⛓️
00:21
Anwar Jibawi
Рет қаралды 41 МЛН